CompSciWeek5
From Predictive Chemistry
Revision as of 12:23, 18 September 2014 by David M. Rogers (talk | contribs) (Created page with "Reading: * Beginning Python, Chapters 7-8 * [http://www.aosabook.org/en/posa/working-with-big-data-in-bioinformatics.html Bioinformatics Code Design] = Class 1: Effective Design…")
Reading:
- Beginning Python, Chapters 7-8
- Bioinformatics Code Design
Class 1: Effective Design
- Structured Code, Bioinformatics example from AOS Book
- Code Testing
- Source Code Versioning
- basic git
Class 2: Using HPC Resources
- Accessing binaries and libraries, using modules
- Using scratch space
- Submitting a job script
- Managing queued jobs
- Advanced scripting tips and tricks
- awk
