Difference between revisions of "CompSciWeek6"
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= Class 1: Effective Design = |
= Class 1: Effective Design = |
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| − | * Code walk-through, parsing and using graphs |
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* Structured Code, Bioinformatics example from AOS Book |
* Structured Code, Bioinformatics example from AOS Book |
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* Code Testing |
* Code Testing |
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Revision as of 10:17, 29 September 2014
- Beginning Python - skim. chapters 8-14 (use as reference material)
- see expecially urlopen on p. 300, forks and threads on p. 304
- Beginning Python - Chapter 15 (Web services)
Class 1: Effective Design
- Structured Code, Bioinformatics example from AOS Book
- Code Testing
- Source Code Versioning
- basic git
Class 2: Using HPC Resources
- Accessing binaries and libraries, using modules
- Using scratch space
- Submitting a job script
- Managing queued jobs
- Advanced scripting tips and tricks
- awk
