CompSciWeek13
From Predictive Chemistry
Revision as of 15:11, 17 November 2014 by David M. Rogers (talk | contribs) (→Numerical Integration + Binary Output Format)
Numerical Integration + Binary Output Format
- Van der Pol Oscillator: <math>\ddot u - \mu (1-u^2) \dot u + u = 0</math>
- Implementations in OpenOffice Spreadsheet, GNU ODE, and Python
- Perturbed initial conditions, Lyapunov exponents, and large deviation principles
- Working well with others: text
- Working with machines: binary
- This is preferable when you have lots and lots of data
- The relevant numpy methods are x.tofile("file") and x = fromfile("file") -- but save("file", x) and x = load("file") are preferred
- inspecting binary formats with od
Example: ELF header
od -t x1 -t c -N 8 /bin/bash
Binary comes in lots of units
8 bits | = 1 byte |
---|---|
4 bits | = 1 nibble |
1 byte | = 1 ascii character |
2 bytes | = 1 short |
4 bytes | = 1 32-bit int = 1 float |
8 bytes | = 1 64-bit int = 1 64-bit address = 1 double = 1 float complex |
16 bytes | = 1 long double = 1 double complex |
Byte ordering on most modern 64-bit processors is little-endian (Intel, AMD)
in base 10, this would mean the 4-digit representation of the number 123 is
3 = 0011 2 = 0010 1 = 0001 0 = 0000
The binary together would read:
0011 0010 0001 0000
Since we have to use 4 digits, but the little end (least significant byte) goes first.
Basis Functions
- Constructing B-splines - tensor method
- Representing the differentiation operator
- Solving PDEs using the implicit method